OverviewThe Earth and Biological Sciences Directorate (EBSD) leads novel and necessary research in three core areas: Atmospheric and Climate Sciences, Biological Sciences, and Environmental Molecular Sciences. The contributions of EBSD staff are many as we continue to elevate the impact of PNNL's science mission: to understand, predict, and control the complex adaptive systems underlying the science behind Earth, energy, and security.ResponsibilitiesThe Computing, Analytics, and Modeling Group at the Pacific Northwest National Laboratory is seeking a post-Masters research associate to support the development of interdisciplinary data resources and data analytics capabilities that will advance DOE Office of Science’s Office of Biological and Environmental Research mission science.Group Description: The Environmental Molecular Sciences Division’s (EMSD’s) new Computing, Analytics, and Modeling (CAM) group focuses on advancing the science of the Environmental Molecular Sciences Laboratory (EMSL) user facility and the mission science of its sponsor, the DOE Office of Science’s Office of Biological and Environmental Research (BER) mission, by delivering world-class capabilities and developments in computational science, data analytics and transformations, and modeling sciences. The group, which reports to the CAM Group Leader, works with researchers and staff in EMSL’s other two science areas (Environmental Transformations and Interactions, or ETI, and Functional and Systems Biology, FSB) to deliver on EMSL’s three strategic science objectives: DigiPhen, MONet, and Modeling and Data Sciences. Due to the centrality of data and computing infrastructure systems in the group’s work, CAM also works closely with the group led by EMSL’s Chief Data Officer. The CAM group has two teams: Systems Modeling, and Data Transformations.As a post-Masters research associate in the Computing, Analytics, and Modeling group, you will be responsible for advancing EMSL’s MONet (Molecular Observation Network) strategic science objective and its Modeling and Data Science Capability (MDS) strategic science objective, through multiple efforts including but not limited to the following
Developing software infrastructure supporting workflows to analyze genomic and metagenomic data.
Aiding in the development of data management systems and workflows for the overall MONet user experience including data portals and data handling.
Aiding in the development of new modeling and data visualization applications to gain deeper insights into data taken as part of the MONet effort.
Integrating new modeling and data visualization applications into the MONet data ecosystem including data models, user portals, etc.
QualificationsMinimum Qualifications:
Candidates must have received a Master’s degree within the past 24 months or within the next 8 months from an accredited college or university. Minimum overall GPA of 3.0 required.
Preferred Qualifications:
Background in bioinformatics, genomics, or related field
Knowledge of environmental science, computer science, and metabolomics
Expertise with mass-spectrometry (MS) data and metadata, including key public resources (e.g. NCBI PubChem) and database usage (SQL, PostgreSQL, and use of RESTful APIs)
Experience with Linux-based software development for scientific applications (bash, Python, R, C), scientific computing libraries and standards (e.g. JSON, ggplot2, Pandas, Numpy, SciPy, SciKit) as well as basic web standard tools (e.g. HTML and Javascript, Flask)
Experience integrating scientific software components and working with operations teams for deployment, e.g. CI/CD and GitLab/GitHub, as well as cloud (Kubernetes, Azure/GCP, etc).
Experience working in software development and support on large, distributed teams
Demonstrated verbal and written communications skills including the ability to communicate efficiently with experimentalists and general audiences
Demonstrated interpersonal skills including the ability to collaborate effectively on diverse, interdisciplinary, distributed research teams
Demonstrated organizational skills that include prioritizing work in dynamic environments, delivering results on-time and on-budget, and creating effective and agile research plans.
Hazardous Working Conditions/EnvironmentNot applicableAdditional InformationNot applicableTesting Designated PositionThis is not a Testing Designated Position (TDP)About PNNLPacific Northwest National Laboratory (PNNL) is a world-class research institution powered by a highly educated, diverse workforce committed to the values of Integrity, Creativity, Collaboration, Impact, and Courage. Every year, scores of dynamic, driven people come to PNNL to work with renowned researchers on meaningful science, innovations and outcomes for the U.S. Department of Energy and other sponsors; here is your chance to be one of them!At PNNL, you will find an exciting research environment and excellent benefits including health insurance, flexible work schedules and telework options. PNNL is located in eastern Washington State—the dry side of Washington known for its stellar outdoor recreation and affordable cost of living. The Lab’s campus is only a 45-minute flight (or 3 hour drive) from Seattle or Portland, and is serviced by the convenient PSC airport, connected to 8 major hubs.Commitment to Excellence, Diversity, Equity, Inclusion, and Equal Employment OpportunityOur laboratory is committed to a diverse and inclusive work environment dedicated to solving critical challenges in fundamental sciences, national security, and energy resiliency. We are proud to be an Equal Employment Opportunity and Affirmative Action employer. In support of this commitment, we encourage people of all racial/ethnic identities, women, veterans, and individuals with disabilities to apply for employment.Pacific Northwest National Laboratory considers all applicants for employment without regard to race, religion, color, sex (including pregnancy, sexual orientation, and gender identity), national origin, age, disability, genetic information (including family medical history), protected veteran status, and any other status or characteristic protected by federal, state, and/or local laws.We are committed to providing reasonable accommodations for individuals with disabilities and disabled veterans in our job application procedures and in employment. If you need assistance or an accommodation due to a disability, contact us at [email protected] .Drug Free WorkplacePNNL is committed to a drug-free workplace supported by Workplace Substance Abuse Program (WSAP) and complies with federal laws prohibiting the possession and use of illegal drugs.If you are offered employment at PNNL, you must pass a drug test prior to commencing employment. PNNL complies with federal law regarding illegal drug use. Under federal law, marijuana remains an illegal drug. If you test positive for any illegal controlled substance, including marijuana, your offer of employment will be withdrawn.HSPD-12 PIV Credential RequirementIn accordance with Homeland Security Presidential Directive 12 (HSPD-12) and Department of Energy (DOE) Order 473.1A, new employees are required to obtain and maintain a HSPD-12 Personal Identity Verification (PIV) Credential. To obtain this credential, new employees must successfully complete and pass a Federal Tier 1 background check investigation. This investigation includes a declaration of illegal drug activities, including use, supply, possession, or manufacture within the last year. This includes marijuana and cannabis derivatives, which are still considered illegal under federal law, regardless of state laws.Mandatory RequirementsPlease be aware that the Department of Energy (DOE) prohibits DOE employees and contractors from having any affiliation with the foreign government of a country DOE has identified as a “country of risk” without explicit approval by DOE and Battelle. If you are offered a position at PNNL and currently have any affiliation with the government of one of these countries, you will be required to disclose this information and recuse yourself of that affiliation or receive approval from DOE and Battelle prior to your first day of employment.Rockstar RewardsEmployees and their families are offered medical insurance, dental insurance, vision insurance, health savings account, flexible spending accounts, basic life insurance, disability insurance, employee assistance program, business travel insurance, tuition assistance, supplemental parental bonding leave, surrogacy and adoption assistance, and fertility support. Employees are automatically enrolled in our company funded pension plan and may enroll in our 401k savings plan. Employees may accrue up to 120 vacation hours per year and may receive ten paid holidays per year.
Research Associates excluded.
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